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Does not precompile on Mac OS 12.2, Intel Core i7, Julia 10.0.0 #2125

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alexeyovchinnikov opened this issue Jan 31, 2024 · 1 comment
Closed

Does not precompile on Mac OS 12.2, Intel Core i7, Julia 10.0.0 #2125

alexeyovchinnikov opened this issue Jan 31, 2024 · 1 comment
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@alexeyovchinnikov
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PkgPrecompileError: The following 1 direct dependency failed to precompile:

OrdinaryDiffEq [1dea7af3-3e70-54e6-95c3-0bf5283fa5ed]

Failed to precompile OrdinaryDiffEq [1dea7af3-3e70-54e6-95c3-0bf5283fa5ed] to "/Users/alexey/.julia/compiled/v1.10/OrdinaryDiffEq/jl_4fgKKV".
[92305] signal (11.1): Segmentation fault: 11
in expression starting at /Users/alexey/.julia/packages/IrrationalConstants/vp5v4/src/stats.jl:3
unknown function (ip: 0x0)
Allocations: 2906 (Pool: 2897; Big: 9); GC: 0
ERROR: LoadError: Failed to precompile IrrationalConstants [92d709cd-6900-40b7-9082-c6be49f344b6] to "/Users/alexey/.julia/compiled/v1.10/IrrationalConstants/jl_5SRZAI".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
@ Base ./loading.jl:2462
[3] compilecache
@ Base ./loading.jl:2334 [inlined]
[4] (::Base.var"#968#969"{Base.PkgId})()
@ Base ./loading.jl:1968
[5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
[6] #mkpidlock#6
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
[7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
[8] #invokelatest#2
@ Base ./essentials.jl:889 [inlined]
[9] invokelatest
@ Base ./essentials.jl:884 [inlined]
[10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:2977
[11] maybe_cachefile_lock
@ Base ./loading.jl:2974 [inlined]
[12] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:1964
[13] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:1806
[14] #invoke_in_world#3
@ Base ./essentials.jl:921 [inlined]
[15] invoke_in_world
@ Base ./essentials.jl:918 [inlined]
[16] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:1797
[17] macro expansion
@ Base ./loading.jl:1784 [inlined]
[18] macro expansion
@ Base ./lock.jl:267 [inlined]
[19] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:1747
[20] #invoke_in_world#3
@ Base ./essentials.jl:921 [inlined]
[21] invoke_in_world
@ Base ./essentials.jl:918 [inlined]
[22] require(into::Module, mod::Symbol)
@ Base ./loading.jl:1740
[23] include
@ Base ./Base.jl:495 [inlined]
[24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2216
[25] top-level scope
@ stdin:3
in expression starting at /Users/alexey/.julia/packages/DiffRules/rcnI0/src/DiffRules.jl:3
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile DiffRules [b552c78f-8df3-52c6-915a-8e097449b14b] to "/Users/alexey/.julia/compiled/v1.10/DiffRules/jl_tBPJcq".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
@ Base ./loading.jl:2462
[3] compilecache
@ Base ./loading.jl:2334 [inlined]
[4] (::Base.var"#968#969"{Base.PkgId})()
@ Base ./loading.jl:1968
[5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
[6] #mkpidlock#6
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
[7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
[8] #invokelatest#2
@ Base ./essentials.jl:889 [inlined]
[9] invokelatest
@ Base ./essentials.jl:884 [inlined]
[10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:2977
[11] maybe_cachefile_lock
@ Base ./loading.jl:2974 [inlined]
[12] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:1964
[13] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:1806
[14] #invoke_in_world#3
@ Base ./essentials.jl:921 [inlined]
[15] invoke_in_world
@ Base ./essentials.jl:918 [inlined]
[16] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:1797
[17] macro expansion
@ Base ./loading.jl:1784 [inlined]
[18] macro expansion
@ Base ./lock.jl:267 [inlined]
[19] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:1747
[20] #invoke_in_world#3
@ Base ./essentials.jl:921 [inlined]
[21] invoke_in_world
@ Base ./essentials.jl:918 [inlined]
[22] require(into::Module, mod::Symbol)
@ Base ./loading.jl:1740
[23] include
@ Base ./Base.jl:495 [inlined]
[24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2216
[25] top-level scope
@ stdin:3
in expression starting at /Users/alexey/.julia/packages/ForwardDiff/PcZ48/src/ForwardDiff.jl:1
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile ForwardDiff [f6369f11-7733-5829-9624-2563aa707210] to "/Users/alexey/.julia/compiled/v1.10/ForwardDiff/jl_4HvtXl".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
@ Base ./loading.jl:2462
[3] compilecache
@ Base ./loading.jl:2334 [inlined]
[4] (::Base.var"#968#969"{Base.PkgId})()
@ Base ./loading.jl:1968
[5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
[6] #mkpidlock#6
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
[7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
[8] #invokelatest#2
@ Base ./essentials.jl:889 [inlined]
[9] invokelatest
@ Base ./essentials.jl:884 [inlined]
[10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:2977
[11] maybe_cachefile_lock
@ Base ./loading.jl:2974 [inlined]
[12] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:1964
[13] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:1806
[14] #invoke_in_world#3
@ Base ./essentials.jl:921 [inlined]
[15] invoke_in_world
@ Base ./essentials.jl:918 [inlined]
[16] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:1797
[17] macro expansion
@ Base ./loading.jl:1784 [inlined]
[18] macro expansion
@ Base ./lock.jl:267 [inlined]
[19] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:1747
[20] #invoke_in_world#3
@ Base ./essentials.jl:921 [inlined]
[21] invoke_in_world
@ Base ./essentials.jl:918 [inlined]
[22] require(into::Module, mod::Symbol)
@ Base ./loading.jl:1740
[23] top-level scope
@ ~/.julia/packages/DiffEqBase/eLhx9/src/DiffEqBase.jl:34
[24] top-level scope
@ ~/.julia/packages/DiffEqBase/eLhx9/src/DiffEqBase.jl:9
[25] include
@ Base ./Base.jl:495 [inlined]
[26] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2216
[27] top-level scope
@ stdin:3
in expression starting at /Users/alexey/.julia/packages/DiffEqBase/eLhx9/src/DiffEqBase.jl:1
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] to "/Users/alexey/.julia/compiled/v1.10/DiffEqBase/jl_KCdRHv".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
@ Base ./loading.jl:2462
[3] compilecache
@ Base ./loading.jl:2334 [inlined]
[4] (::Base.var"#968#969"{Base.PkgId})()
@ Base ./loading.jl:1968
[5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
[6] #mkpidlock#6
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
[7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.10.0+0.x64.apple.darwin14/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
[8] #invokelatest#2
@ Base ./essentials.jl:889 [inlined]
[9] invokelatest
@ Base ./essentials.jl:884 [inlined]
[10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:2977
[11] maybe_cachefile_lock
@ Base ./loading.jl:2974 [inlined]
[12] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:1964
[13] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:1806
[14] #invoke_in_world#3
@ Base ./essentials.jl:921 [inlined]
[15] invoke_in_world
@ Base ./essentials.jl:918 [inlined]
[16] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:1797
[17] macro expansion
@ Base ./loading.jl:1784 [inlined]
[18] macro expansion
@ Base ./lock.jl:267 [inlined]
[19] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:1747
[20] #invoke_in_world#3
@ Base ./essentials.jl:921 [inlined]
[21] invoke_in_world
@ Base ./essentials.jl:918 [inlined]
[22] require(into::Module, mod::Symbol)
@ Base ./loading.jl:1740
[23] include
@ Base ./Base.jl:495 [inlined]
[24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
@ Base ./loading.jl:2216
[25] top-level scope
@ stdin:3
in expression starting at /Users/alexey/.julia/packages/OrdinaryDiffEq/D4BiZ/src/OrdinaryDiffEq.jl:1
in expression starting at stdin:

===============================
]st -m

returns this:

Status ~/.julia/environments/v1.10/Manifest.toml
[47edcb42] ADTypes v0.2.6
⌅ [79e6a3ab] Adapt v3.7.2
[ec485272] ArnoldiMethod v0.2.0
[4fba245c] ArrayInterface v7.7.0
[4c555306] ArrayLayouts v1.5.2
[62783981] BitTwiddlingConvenienceFunctions v0.1.5
[2a0fbf3d] CPUSummary v0.2.4
[fb6a15b2] CloseOpenIntervals v0.1.12
[38540f10] CommonSolve v0.2.4
[bbf7d656] CommonSubexpressions v0.3.0
[34da2185] Compat v4.12.0
[2569d6c7] ConcreteStructs v0.2.3
[187b0558] ConstructionBase v1.5.4
[adafc99b] CpuId v0.3.1
[9a962f9c] DataAPI v1.16.0
[864edb3b] DataStructures v0.18.16
[e2d170a0] DataValueInterfaces v1.0.0
[2b5f629d] DiffEqBase v6.146.0
[163ba53b] DiffResults v1.1.0
[b552c78f] DiffRules v1.15.1
[ffbed154] DocStringExtensions v0.9.3
[4e289a0a] EnumX v1.0.4
[f151be2c] EnzymeCore v0.6.5
[d4d017d3] ExponentialUtilities v1.25.0
[e2ba6199] ExprTools v0.1.10
[7034ab61] FastBroadcast v0.2.8
[9aa1b823] FastClosures v0.3.2
[29a986be] FastLapackInterface v2.0.1
[1a297f60] FillArrays v1.9.3
[6a86dc24] FiniteDiff v2.22.0
[f6369f11] ForwardDiff v0.10.36
[069b7b12] FunctionWrappers v1.1.3
[77dc65aa] FunctionWrappersWrappers v0.1.3
⌃ [46192b85] GPUArraysCore v0.1.5
[c145ed77] GenericSchur v0.5.3
[86223c79] Graphs v1.9.0
[3e5b6fbb] HostCPUFeatures v0.1.16
[615f187c] IfElse v0.1.1
[d25df0c9] Inflate v0.1.4
[92d709cd] IrrationalConstants v0.2.2
[82899510] IteratorInterfaceExtensions v1.0.0
[692b3bcd] JLLWrappers v1.5.0
[ef3ab10e] KLU v0.4.1
[ba0b0d4f] Krylov v0.9.5
[10f19ff3] LayoutPointers v0.1.15
[50d2b5c4] Lazy v0.15.1
[5078a376] LazyArrays v1.8.3
[d3d80556] LineSearches v7.2.0
[7ed4a6bd] LinearSolve v2.22.1
[2ab3a3ac] LogExpFunctions v0.3.26
[bdcacae8] LoopVectorization v0.12.166
[1914dd2f] MacroTools v0.5.13
[d125e4d3] ManualMemory v0.1.8
[a3b82374] MatrixFactorizations v2.1.0
[bb5d69b7] MaybeInplace v0.1.1
[46d2c3a1] MuladdMacro v0.2.4
[d41bc354] NLSolversBase v7.8.3
[77ba4419] NaNMath v1.0.2
[8913a72c] NonlinearSolve v3.5.2
[6fe1bfb0] OffsetArrays v1.13.0
[bac558e1] OrderedCollections v1.6.3
[1dea7af3] OrdinaryDiffEq v6.70.0
[65ce6f38] PackageExtensionCompat v1.0.2
[d96e819e] Parameters v0.12.3
[f517fe37] Polyester v0.7.9
[1d0040c9] PolyesterWeave v0.2.1
[d236fae5] PreallocationTools v0.4.17
[aea7be01] PrecompileTools v1.2.0
[21216c6a] Preferences v1.4.1
[3cdcf5f2] RecipesBase v1.3.4
[731186ca] RecursiveArrayTools v3.7.0
[f2c3362d] RecursiveFactorization v0.2.21
[189a3867] Reexport v1.2.2
[ae029012] Requires v1.3.0
[7e49a35a] RuntimeGeneratedFunctions v0.5.12
[94e857df] SIMDTypes v0.1.0
[476501e8] SLEEFPirates v0.6.42
[0bca4576] SciMLBase v2.22.0
[c0aeaf25] SciMLOperators v0.3.7
[efcf1570] Setfield v1.1.1
[727e6d20] SimpleNonlinearSolve v1.3.1
[699a6c99] SimpleTraits v0.9.4
[ce78b400] SimpleUnPack v1.1.0
[47a9eef4] SparseDiffTools v2.16.0
[e56a9233] Sparspak v0.3.9
[276daf66] SpecialFunctions v2.3.1
[aedffcd0] Static v0.8.8
[0d7ed370] StaticArrayInterface v1.5.0
[90137ffa] StaticArrays v1.9.2
[1e83bf80] StaticArraysCore v1.4.2
[7792a7ef] StrideArraysCore v0.5.2
[2efcf032] SymbolicIndexingInterface v0.3.5
[3783bdb8] TableTraits v1.0.1
[bd369af6] Tables v1.11.1
[8290d209] ThreadingUtilities v0.5.2
[a759f4b9] TimerOutputs v0.5.23
[d5829a12] TriangularSolve v0.1.20
[410a4b4d] Tricks v0.1.8
[781d530d] TruncatedStacktraces v1.4.0
[3a884ed6] UnPack v1.0.2
[3d5dd08c] VectorizationBase v0.21.65
[19fa3120] VertexSafeGraphs v0.2.0
[1d5cc7b8] IntelOpenMP_jll v2024.0.2+0
[856f044c] MKL_jll v2024.0.0+0
[efe28fd5] OpenSpecFun_jll v0.5.5+0
[0dad84c5] ArgTools v1.1.1
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8ba89e20] Distributed
[f43a241f] Downloads v1.6.0
[7b1f6079] FileWatching
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[4af54fe1] LazyArtifacts
[b27032c2] LibCURL v0.6.4
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[ca575930] NetworkOptions v1.2.0
[44cfe95a] Pkg v1.10.0
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA v0.7.0
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays v1.10.0
[10745b16] Statistics v1.10.0
[4607b0f0] SuiteSparse
[fa267f1f] TOML v1.0.3
[a4e569a6] Tar v1.10.0
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
[e66e0078] CompilerSupportLibraries_jll v1.0.5+1
[deac9b47] LibCURL_jll v8.4.0+0
[e37daf67] LibGit2_jll v1.6.4+0
[29816b5a] LibSSH2_jll v1.11.0+1
[c8ffd9c3] MbedTLS_jll v2.28.2+1
[14a3606d] MozillaCACerts_jll v2023.1.10
[4536629a] OpenBLAS_jll v0.3.23+2
[05823500] OpenLibm_jll v0.8.1+2
[bea87d4a] SuiteSparse_jll v7.2.1+1
[83775a58] Zlib_jll v1.2.13+1
[8e850b90] libblastrampoline_jll v5.8.0+1
[8e850ede] nghttp2_jll v1.52.0+1
[3f19e933] p7zip_jll v17.4.0+2

===================
]st

returns this:

Status ~/.julia/environments/v1.10/Project.toml
[1dea7af3] OrdinaryDiffEq v6.70.0
@ChrisRackauckas
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Isolated to upstream JuliaMath/IrrationalConstants.jl#30

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@ChrisRackauckas @alexeyovchinnikov