resource.md

Resource Page

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Reference

reference from GATK bundle - please visit ftp.
reference hg19 from google cloud

GATK Bundle

reference from GATK bundle - please visit ftp and download two files below. dbsnp_138.hg19.vcf.gz Mills_and_1000G_gold_standard.indels.hg19.sites.vcf.gz

Tools

samtools
bwa-0.7.17.tar.bz2
picard
GATK4
snpEff

Raw Data

SRR000982_1.filt.fastq.gz
SRR000982_2.filt.fastq.gz