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DESCRIPTION
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DESCRIPTION
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Package: presto
Title: Fast Functions for Differential Expression using Wilcox and AUC
Version: 1.0.0
Authors@R: c(
person("Ilya", "Korsunsky", email = "[email protected]",
role = c("cre", "aut"), comment = c(ORCID = "0000-0003-4848-3948")),
person("Aparna", "Nathan",
role = "aut"),
person("Nghia", "Millard",
role = "aut", comment = c(ORCID = "0000-0002-0518-7674")),
person("Soumya", "Raychaudhuri",
role = c("aut"), comment = c(ORCID = "0000-0002-1901-8265"))
)
Description: Scalable implementation of the Wilcoxon rank sum test and auROC statistic. Interfaces to dense and sparse matrices, as well as genomics analysis frameworks Seurat and SingleCellExperiment.
License: GPL-3
Encoding: UTF-8
Depends: R (>= 3.4.0), Rcpp, data.table
LinkingTo: Rcpp, RcppArmadillo
biocViews:
Imports:
dplyr,
methods,
tidyr,
reshape2,
Matrix,
rlang,
stats,
utils,
DESeq2
RoxygenNote: 6.1.1
Suggests:
knitr,
rmarkdown,
testthat,
Seurat,
SingleCellExperiment,
SummarizedExperiment,
broom,
BiocStyle
NeedsCompilation: yes
VignetteBuilder: knitr