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stforte_py39_torch121_cu113.yaml
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stforte_py39_torch121_cu113.yaml
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name: stforte
channels:
- pyg
- pytorch
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _py-xgboost-mutex=2.0=gpu_0
- _r-mutex=1.0.0=anacondar_1
- _sysroot_linux-64_curr_repodata_hack=3=haa98f57_10
- absl-py=1.4.0=py39h06a4308_0
- aiohttp=3.9.1=py39hd1e30aa_0
- aiosignal=1.3.1=pyhd8ed1ab_0
- alsa-lib=1.2.8=h166bdaf_0
- anndata=0.10.3=pyhd8ed1ab_0
- arpack=3.7.0=hdefa2d7_2
- array-api-compat=1.4=pyhd8ed1ab_0
- asttokens=2.4.1=pyhd8ed1ab_0
- async-timeout=4.0.3=pyhd8ed1ab_0
- attr=2.5.1=h166bdaf_1
- attrs=23.2.0=pyh71513ae_0
- binutils_impl_linux-64=2.38=h2a08ee3_1
- blas=1.0=mkl
- blinker=1.7.0=pyhd8ed1ab_0
- bokeh=3.3.2=pyhd8ed1ab_0
- brotli=1.1.0=hd590300_1
- brotli-bin=1.1.0=hd590300_1
- brotli-python=1.0.9=py39h6a678d5_7
- bwidget=1.9.11=1
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.24.0=hd590300_0
- ca-certificates=2024.6.2=hbcca054_0
- cached-property=1.5.2=hd8ed1ab_1
- cached_property=1.5.2=pyha770c72_1
- cachetools=5.3.2=pyhd8ed1ab_0
- cairo=1.16.0=ha61ee94_1014
- certifi=2024.6.2=pyhd8ed1ab_0
- cffi=1.16.0=py39h5eee18b_0
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- chex=0.1.5=py39h06a4308_0
- click=8.1.7=unix_pyh707e725_0
- colorama=0.4.6=pyhd8ed1ab_0
- comm=0.1.4=pyhd8ed1ab_0
- contextlib2=21.6.0=py39h06a4308_0
- contourpy=1.2.0=py39h7633fee_0
- cryptography=41.0.7=py39hdda0065_0
- cuda-version=11.3=hbc958af_2
- cudatoolkit=11.3.1=h2bc3f7f_2
- curl=8.4.0=hdbd6064_1
- cycler=0.12.1=pyhd8ed1ab_0
- dbus=1.13.18=hb2f20db_0
- debugpy=1.6.7=py39h6a678d5_0
- decorator=5.1.1=pyhd8ed1ab_0
- dm-tree=0.1.7=py39h6a678d5_1
- docrep=0.3.2=pyh44b312d_0
- et_xmlfile=1.1.0=py39h06a4308_0
- exceptiongroup=1.2.0=pyhd8ed1ab_0
- executing=2.0.1=pyhd8ed1ab_0
- expat=2.5.0=hcb278e6_1
- ffmpeg=4.3=hf484d3e_0
- fftw=3.3.10=nompi_hc118613_108
- flax=0.6.1=pyhd8ed1ab_1
- font-ttf-dejavu-sans-mono=2.37=hd3eb1b0_0
- font-ttf-inconsolata=2.001=hcb22688_0
- font-ttf-source-code-pro=2.030=hd3eb1b0_0
- font-ttf-ubuntu=0.83=h8b1ccd4_0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-anaconda=1=h8fa9717_0
- fonts-conda-ecosystem=1=hd3eb1b0_0
- fonttools=4.47.0=py39hd1e30aa_0
- freetype=2.12.1=h4a9f257_0
- fribidi=1.0.10=h7b6447c_0
- frozenlist=1.4.1=py39hd1e30aa_0
- fsspec=2023.12.2=pyhca7485f_0
- gcc_impl_linux-64=11.2.0=h1234567_1
- gettext=0.21.1=h27087fc_0
- gfortran_impl_linux-64=11.2.0=h7a446d4_16
- giflib=5.2.1=h5eee18b_3
- glib=2.78.1=hfc55251_0
- glib-tools=2.78.1=hfc55251_0
- glpk=5.0=h445213a_0
- gmp=6.2.1=h295c915_3
- gnutls=3.6.15=he1e5248_0
- google-auth=2.25.2=pyhca7485f_0
- google-auth-oauthlib=0.4.6=pyhd8ed1ab_0
- graphite2=1.3.14=h295c915_1
- grpcio=1.59.3=py39h174d805_0
- gsl=2.7.1=h6e86dc7_1
- gst-plugins-base=1.22.0=h4243ec0_2
- gstreamer=1.22.0=h25f0c4b_2
- gstreamer-orc=0.4.34=hd590300_0
- gxx_impl_linux-64=11.2.0=h1234567_1
- h5py=3.8.0=nompi_py39h89bf01e_101
- harfbuzz=6.0.0=h8e241bc_0
- hdf5=1.14.0=nompi_hb72d44e_103
- icu=70.1=h27087fc_0
- idna=3.4=py39h06a4308_0
- igraph=0.10.3=hb9ddf80_0
- importlib-metadata=7.0.1=pyha770c72_0
- importlib-resources=6.1.1=pyhd8ed1ab_0
- importlib_metadata=7.0.1=hd8ed1ab_0
- importlib_resources=6.1.1=pyhd8ed1ab_0
- intel-openmp=2023.1.0=hdb19cb5_46306
- ipykernel=6.28.0=pyhd33586a_0
- ipython=8.18.1=pyh707e725_3
- ipywidgets=8.0.4=py39h06a4308_0
- jack=1.9.22=h11f4161_0
- jax=0.3.25=py39h06a4308_0
- jaxlib=0.3.25=py39h6a678d5_1
- jedi=0.19.1=pyhd8ed1ab_0
- jinja2=3.1.2=pyhd8ed1ab_1
- joblib=1.3.2=pyhd8ed1ab_0
- jpeg=9e=h5eee18b_1
- jsonschema=4.20.0=pyhd8ed1ab_0
- jsonschema-specifications=2023.12.1=pyhd8ed1ab_0
- jupyter_client=8.6.0=pyhd8ed1ab_0
- jupyter_core=5.6.1=py39hf3d152e_0
- jupyterlab_widgets=3.0.9=py39h06a4308_0
- kernel-headers_linux-64=3.10.0=h57e8cba_10
- kiwisolver=1.4.2=py39hf939315_1
- krb5=1.20.1=h143b758_1
- lame=3.100=h7b6447c_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.38=h1181459_1
- leidenalg=0.9.1=py39h227be39_0
- lerc=3.0=h295c915_0
- libabseil=20230802.1=cxx17_h59595ed_0
- libaec=1.1.2=h59595ed_1
- libblas=3.9.0=1_h86c2bf4_netlib
- libbrotlicommon=1.1.0=hd590300_1
- libbrotlidec=1.1.0=hd590300_1
- libbrotlienc=1.1.0=hd590300_1
- libcap=2.66=ha37c62d_0
- libcblas=3.9.0=5_h92ddd45_netlib
- libclang=15.0.7=default_hb11cfb5_4
- libclang13=15.0.7=default_ha2b6cf4_4
- libcups=2.3.3=h36d4200_3
- libcurl=8.4.0=h251f7ec_1
- libdb=6.2.32=h6a678d5_1
- libdeflate=1.17=h5eee18b_1
- libedit=3.1.20230828=h5eee18b_0
- libev=4.33=hd590300_2
- libevent=2.1.10=h28343ad_4
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.4=h6a678d5_0
- libflac=1.4.3=h59595ed_0
- libgcc-devel_linux-64=11.2.0=h1234567_1
- libgcc-ng=13.2.0=h807b86a_3
- libgcrypt=1.10.3=hd590300_0
- libgfortran-ng=13.2.0=h69a702a_3
- libgfortran5=13.2.0=ha4646dd_3
- libglib=2.78.1=hebfc3b9_0
- libgomp=13.2.0=h807b86a_3
- libgpg-error=1.47=h71f35ed_0
- libgrpc=1.59.3=hd6c4280_0
- libiconv=1.17=hd590300_2
- libidn2=2.3.4=h5eee18b_0
- liblapack=3.9.0=5_h92ddd45_netlib
- libllvm11=11.1.0=hf817b99_2
- libllvm14=14.0.6=hcd5def8_4
- libllvm15=15.0.7=hadd5161_1
- libnghttp2=1.57.0=h2d74bed_0
- libogg=1.3.5=h27cfd23_1
- libopenblas=0.3.26=pthreads_h413a1c8_0
- libopus=1.3.1=h7b6447c_0
- libpng=1.6.39=h5eee18b_0
- libpq=15.2=hb675445_0
- libprotobuf=4.24.4=hf27288f_0
- libre2-11=2023.06.02=h7a70373_0
- libsndfile=1.2.2=hc60ed4a_1
- libsodium=1.0.18=h36c2ea0_1
- libsqlite=3.44.2=h2797004_0
- libssh2=1.10.0=ha35d2d1_2
- libstdcxx-devel_linux-64=11.2.0=h1234567_1
- libstdcxx-ng=13.2.0=h7e041cc_3
- libsystemd0=252=h2a991cd_0
- libtasn1=4.19.0=h5eee18b_0
- libtiff=4.5.1=h6a678d5_0
- libtool=2.4.7=h27087fc_0
- libudev1=253=h0b41bf4_0
- libunistring=0.9.10=h27cfd23_0
- libuuid=2.38.1=h0b41bf4_0
- libvorbis=1.3.7=h7b6447c_0
- libwebp=1.3.2=h11a3e52_0
- libwebp-base=1.3.2=h5eee18b_0
- libxcb=1.13=h1bed415_1
- libxgboost=2.0.3=cuda118_hd3b444d_0
- libxkbcommon=1.0.3=he3ba5ed_0
- libxml2=2.10.3=hca2bb57_4
- libzlib=1.2.13=hd590300_5
- lightning-utilities=0.10.0=pyhd8ed1ab_0
- llvmlite=0.41.1=py39h174d805_0
- loompy=3.0.6=py_0
- louvain=0.8.0=py39h5a03fae_1
- lz4-c=1.9.4=h6a678d5_0
- make=4.2.1=h1bed415_1
- markdown=3.5.1=pyhd8ed1ab_0
- markdown-it-py=2.2.0=py39h06a4308_1
- markupsafe=2.1.3=py39hd1e30aa_1
- matplotlib=3.8.2=py39hf3d152e_0
- matplotlib-base=3.8.2=py39he9076e7_0
- matplotlib-inline=0.1.6=pyhd8ed1ab_0
- mdurl=0.1.0=py39h06a4308_0
- metis=5.1.0=h59595ed_1007
- mkl=2023.1.0=h213fc3f_46344
- mkl-service=2.4.0=py39h5eee18b_1
- mkl_fft=1.3.8=py39h5eee18b_0
- mkl_random=1.2.4=py39hdb19cb5_0
- ml-collections=0.1.1=pyhd8ed1ab_0
- mpfr=4.2.1=h9458935_0
- mpg123=1.32.3=h59595ed_0
- msgpack-python=1.0.3=py39hd09550d_0
- mudata=0.2.3=pyhd8ed1ab_0
- multidict=6.0.4=py39hd1e30aa_1
- multipledispatch=0.6.0=py39h06a4308_0
- munkres=1.1.4=pyh9f0ad1d_0
- mysql=5.7.20=hf484d3e_1001
- mysql-common=8.0.32=ha901b37_0
- mysql-libs=8.0.32=hd7da12d_0
- natsort=8.4.0=pyhd8ed1ab_0
- nbformat=5.9.2=pyhd8ed1ab_0
- nccl=2.19.4.1=h0800d71_0
- ncurses=6.4=h6a678d5_0
- nest-asyncio=1.5.8=pyhd8ed1ab_0
- nettle=3.7.3=hbbd107a_1
- networkx=3.2=pyhd8ed1ab_0
- nspr=4.35=h6a678d5_0
- nss=3.89.1=h6a678d5_0
- numba=0.58.1=py39h615d6bd_0
- numpy=1.24.3=py39hf6e8229_1
- numpy-base=1.24.3=py39h060ed82_1
- numpy_groupies=0.11.1=pyhd8ed1ab_0
- numpyro=0.13.2=pyhd8ed1ab_0
- oauthlib=3.2.2=pyhd8ed1ab_0
- openh264=2.1.1=h4ff587b_0
- openjpeg=2.4.0=h3ad879b_0
- openpyxl=3.0.10=py39h5eee18b_0
- openssl=3.1.6=h4ab18f5_0
- opt_einsum=3.3.0=pyhd3eb1b0_1
- optax=0.1.4=py39h06a4308_0
- packaging=23.2=pyhd8ed1ab_0
- pandas=1.4.2=py39h1832856_1
- pango=1.50.14=hd33c08f_0
- parso=0.8.3=pyhd8ed1ab_0
- patsy=0.5.5=pyhd8ed1ab_0
- pcre=8.45=h9c3ff4c_0
- pcre2=10.40=hc3806b6_0
- pexpect=4.8.0=pyh1a96a4e_2
- pickleshare=0.7.5=py_1003
- pillow=10.0.1=py39ha6cbd5a_0
- pip=23.3.1=py39h06a4308_0
- pixman=0.40.0=h7f8727e_1
- pkgutil-resolve-name=1.3.10=pyhd8ed1ab_1
- platformdirs=4.1.0=pyhd8ed1ab_0
- plotly=5.18.0=pyhd8ed1ab_0
- prompt-toolkit=3.0.42=pyha770c72_0
- protobuf=4.24.4=py39h60f6b12_0
- psutil=5.9.7=py39hd1e30aa_0
- pthread-stubs=0.4=h36c2ea0_1001
- ptyprocess=0.7.0=pyhd3deb0d_0
- pulseaudio=16.1=ha8d29e2_1
- pure_eval=0.2.2=pyhd8ed1ab_0
- py-xgboost=2.0.3=cuda118_py39h40095f8_0
- pyasn1=0.5.1=pyhd8ed1ab_0
- pyasn1-modules=0.3.0=pyhd8ed1ab_0
- pycparser=2.21=pyhd3eb1b0_0
- pyg=2.2.0=py39_torch_1.12.0_cu113
- pygments=2.17.2=pyhd8ed1ab_0
- pyjwt=2.8.0=pyhd8ed1ab_0
- pymde=0.1.18=py39h0f8d45d_1
- pynndescent=0.5.11=pyhca7485f_0
- pyopenssl=23.2.0=py39h06a4308_0
- pyparsing=3.1.1=pyhd8ed1ab_0
- pyqt=5.15.4=py39h5a03fae_0
- pyqt5-sip=12.9.0=py39h5a03fae_0
- pyro-api=0.1.2=pyhd8ed1ab_0
- pyro-ppl=1.8.6=pyhd8ed1ab_0
- pysocks=1.7.1=py39h06a4308_0
- python=3.9.16=h955ad1f_3
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-fastjsonschema=2.19.1=pyhd8ed1ab_0
- python-igraph=0.10.4=py39hfac54ea_0
- python_abi=3.9=2_cp39
- pytorch=1.12.1=py3.9_cuda11.3_cudnn8.3.2_0
- pytorch-cluster=1.6.0=py39_torch_1.12.0_cu113
- pytorch-lightning=1.9.4=pyhd8ed1ab_1
- pytorch-mutex=1.0=cuda
- pytorch-scatter=2.1.0=py39_torch_1.12.0_cu113
- pytorch-sparse=0.6.16=py39_torch_1.12.0_cu113
- pytz=2023.3.post1=pyhd8ed1ab_0
- pyu2f=0.1.5=pyhd8ed1ab_0
- pyyaml=6.0.1=py39hd1e30aa_1
- pyzmq=25.1.0=py39h6a678d5_0
- qt-main=5.15.8=h5d23da1_6
- r-base=4.2.3=ha7d60f8_0
- re2=2023.06.02=h2873b5e_0
- readline=8.2=h5eee18b_0
- referencing=0.32.1=pyhd8ed1ab_0
- requests=2.31.0=py39h06a4308_0
- requests-oauthlib=1.3.1=pyhd8ed1ab_0
- rich=13.3.5=py39h06a4308_0
- rpds-py=0.17.1=py39h9fdd4d6_0
- rpy2=3.5.11=py39r42h44dd56e_3
- rsa=4.9=pyhd8ed1ab_0
- scanpy=1.9.2=pyhd8ed1ab_0
- scikit-misc=0.1.4=py39hc77b598_4
- scvi-tools=0.20.1=pyhd8ed1ab_0
- seaborn=0.13.0=hd8ed1ab_0
- seaborn-base=0.13.0=pyhd8ed1ab_0
- sed=4.8=h7b6447c_0
- session-info=1.0.0=pyhd8ed1ab_0
- setuptools=68.2.2=py39h06a4308_0
- simplegeneric=0.8.1=py39h06a4308_2
- sip=6.5.1=py39he80948d_2
- six=1.16.0=pyh6c4a22f_0
- sqlite=3.41.2=h5eee18b_0
- stack_data=0.6.2=pyhd8ed1ab_0
- statsmodels=0.13.5=py39h2ae25f5_2
- stdlib-list=0.8.0=pyhd8ed1ab_0
- suitesparse=5.10.1=h9e50725_1
- sysroot_linux-64=2.17=h57e8cba_10
- tbb=2021.8.0=hdb19cb5_0
- tenacity=8.2.3=pyhd8ed1ab_0
- tensorboard=2.10.1=pyhd8ed1ab_0
- tensorboard-data-server=0.6.1=py39h3ccb8fc_4
- tensorboard-plugin-wit=1.8.1=pyhd8ed1ab_0
- texttable=1.7.0=pyhd8ed1ab_0
- threadpoolctl=3.2.0=pyha21a80b_0
- tk=8.6.13=noxft_h4845f30_101
- tktable=2.10=h14c3975_0
- toml=0.10.2=pyhd8ed1ab_0
- toolz=0.12.0=py39h06a4308_0
- torchaudio=0.12.1=py39_cu113
- torchmetrics=1.2.1=pyhd8ed1ab_0
- torchvision=0.13.1=py39_cu113
- tornado=6.3.3=py39hd1e30aa_1
- tqdm=4.66.1=pyhd8ed1ab_0
- traitlets=5.14.0=pyhd8ed1ab_0
- typing-extensions=4.7.1=py39h06a4308_0
- typing_extensions=4.7.1=py39h06a4308_0
- tzdata=2023c=h04d1e81_0
- tzlocal=2.1=py39h06a4308_1
- umap-learn=0.5.5=py39hf3d152e_0
- unicodedata2=15.1.0=py39hd1e30aa_0
- urllib3=1.26.18=py39h06a4308_0
- wcwidth=0.2.12=pyhd8ed1ab_0
- werkzeug=3.0.1=pyhd8ed1ab_0
- wheel=0.41.2=py39h06a4308_0
- widgetsnbextension=4.0.5=py39h06a4308_0
- xcb-util=0.4.0=h516909a_0
- xcb-util-image=0.4.0=h166bdaf_0
- xcb-util-keysyms=0.4.0=h516909a_0
- xcb-util-renderutil=0.3.9=h166bdaf_0
- xcb-util-wm=0.4.1=h516909a_0
- xgboost=2.0.3=cuda118_py39h40095f8_0
- xlrd=1.2.0=py_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.8.4=h0b41bf4_0
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.3.0=hd590300_0
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h27cfd23_1007
- xyzservices=2023.10.1=pyhd8ed1ab_0
- xz=5.4.5=h5eee18b_0
- yaml=0.2.5=h7f98852_2
- yarl=1.9.3=py39hd1e30aa_0
- zeromq=4.3.4=h9c3ff4c_1
- zipp=3.17.0=pyhd8ed1ab_0
- zlib=1.2.13=hd590300_5
- zstd=1.5.5=hc292b87_0
- pip:
- annoy==1.17.3
- deprecated==1.2.14
- fbpca==1.0
- geosketch==1.2
- harmonypy==0.0.9
- intervaltree==3.1.0
- kaleido==0.2.1
- paste2==1.0.1
- pot==0.9.3
- pydot==2.0.0
- pyg-lib==0.3.1+pt112cu113
- scanorama==1.7.4
- scib==1.1.4
- scikit-learn==1.3.2
- scipy==1.11.4
- sortedcontainers==2.4.0
- torch-cluster==1.6.3
- torch-scatter==2.1.2
- torch-sparse==0.6.18
- torch-spline-conv==1.2.2
- torch-tb-profiler==0.4.3
- wrapt==1.16.0