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Hi, The Best, |
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So the issue now is that it appears that your data contains more than just gene expression data. That is why it returns a list instead of a matrix as the message details. Therefore when using
Best, |
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I've come across this error before and entirely forgot how I resolved it- hoping someone here remembers!
Error message:
Error in Read10X(data.dir = "C:/Users/*****/Desktop/CITE-seq data/skin 239/barcodes239.tsv.gz") :
Directory provided does not exist
Code for the message:
rna.data <- Read10X(data.dir = "C:/Users/*****/Desktop/CITE-seq data/skin 239/barcodes239.tsv.gz")
Here's all the libraries & packages I've tried loading in:
library(SeuratData)
library(ggplot2)
install.packages("Seurat")
library(Seurat)
install.packages(c('dplyr','patchwork'))
library(dplyr)
library(patchwork)
If I don't include the file name I get the error asking for a .tsv.gz file and I'm confident this should be the right line to load in a barcode file in order to make a ridge plot....
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