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hey,
i generated a sce object using readH5AD with big object and i am failing to convert it the delayed matrix to dgCMatrix or CsparseMatrix and i wanted to ask if this is related to how readH5AD works and if you have any advice on how to convert the matrix would apperciate it.
thanks
If you have managed to get a SingleCellExperiment object then {zellkonverter} is no longer involved so this might be a better question for the {DelayedArray} maintainers. Do you see the same problem if you try it on a subset of the matrix?
Was the H5AD file created with zellkonverter::writeH5AD() and/or do you have any issues reading it in Python? If that is the case it might be something that needs to be addressed here.
hey,
i generated a sce object using readH5AD with big object and i am failing to convert it the delayed matrix to dgCMatrix or CsparseMatrix and i wanted to ask if this is related to how readH5AD works and if you have any advice on how to convert the matrix would apperciate it.
thanks
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