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0.9.0

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@iromeo iromeo released this 11 Jul 16:25
· 17 commits to master since this release

Version 0.9.0

Released on Jul 11th 2019

Changed

  • BedEntry.unpack logic has changed significantly. It now throws on missing fields. The exception can be
    used to determine the offending field and adjust the BED format correspondingly.
  • BedEntry.unpack now controls the extra fields parsing with a flag instead of a number. The old signature
    remains available for compatibility sake, but is deprecated.
    New
  • BedEntryUnpackException is thrown when BedEntry.unpack fails to parse an entry. The exception properties
    provide the reason and the number of the field which caused parsing to fail.
    Fixed
  • ExtendedBedEntry.score is now Int instead of Short. The reason for this is that many
    BED file providers (e.g. MACS2, SICER) don't respect the UCSC standard which limits the score
    to 0..1000 range, and we want to be able to parse those files.