Another reiteration of CRAN checks for the new version.

enblacar · Jan 12, 2023 · e6358b2 · e6358b2
1 parent 4f3f9dc
commit e6358b2
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Showing 18 changed files with 44 additions and 2,142 deletions.
diff --git a/CRAN-SUBMISSION b/CRAN-SUBMISSION
@@ -1,3 +1,3 @@
 Version: 1.1.1
-Date: 2023-01-11 17:37:20 UTC
-SHA: e2ef21aed669baeea241c031ef4147871457e778
+Date: 2023-01-12 11:03:54 UTC
+SHA: 4f3f9dc095fb81d8972f246ac251686d26a2853f
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: SCpubr
 Type: Package
 Title: Generate Publication Ready Visualizations of Single Cell Transcriptomics Data
-Version: 1.1.1.9000
+Version: 1.1.1
 Authors@R: person("Enrique", "Blanco-Carmona", email = "[email protected]", role = c("cre", "aut"), comment = c(ORCID = "0000-0002-1208-1691"))
 Description: A system that provides a streamlined way of generating publication ready plots for known Single-Cell transcriptomics data in a “publication ready” format. This is, the goal is to automatically generate plots with the highest quality possible, that can be used right away or with minimal modifications for a research article.
 License: GPL-3
@@ -61,13 +61,9 @@ Suggests:
     enrichplot,
     ggnewscale,
     AnnotationDbi,
-    org.Hs.eg.db,
-    liana (>= 0.1.6),
-    ggsankey (>= 0.0.99999)
+    org.Hs.eg.db
 VignetteBuilder: knitr
 Config/testthat/edition: 3
 biocViews: 
     Software, SingleCell, Visualization
-Remotes: 
-    saezlab/liana,
-    davidsjoberg/ggsankey
+
diff --git a/NAMESPACE b/NAMESPACE
@@ -19,14 +19,11 @@ export(do_FunctionalAnnotationPlot)
 export(do_GeyserPlot)
 export(do_GroupedGOTermPlot)
 export(do_GroupwiseDEPlot)
-export(do_LigandReceptorPlot)
 export(do_NebulosaPlot)
 export(do_PathwayActivityPlot)
 export(do_RidgePlot)
-export(do_SankeyPlot)
 export(do_TFActivityPlot)
 export(do_TermEnrichmentPlot)
 export(do_ViolinPlot)
 export(do_VolcanoPlot)
-export(save_Plot)
 export(state_dependencies)
diff --git a/R/do_LigandReceptorPlot.R b/R/do_LigandReceptorPlot.R
diff --git a/R/do_SankeyPlot.R b/R/do_SankeyPlot.R